Main Page
Proteus is part of the University Research Computing Facility.
Contents
Thing 0 - NO DATA BACKUPS AT ALL
URCF DOES NOT PROVIDE ANY FORM OF BACKUP FOR USER AND RESEARCH GROUP DATA. DATA BACKUP IS THE RESPONSIBILITY OF EACH USER OR GROUP.
For some suggestions on backing up data, see Backup Solutions.
Getting Help
Please contact URCF support via the issue tracking system:
urcf-support@drexel.edu
This ensures a record is kept of your request and all work done for it.
Please copy and paste any input you typed and resulting error messages in your email. Do not summarize, or try to reproduce the message from memory.
See also: Frequently Encountered Problems
Service Status
Proteus is online. Please report irregularities to urcf-support@drexel.edu
Trouble Changing Password?
Are you having trouble changing your password? Please see this: Introduction to Using Proteus#Changing Passwords
Web Portal
The web portal (https://proteusmaster.urcf.drexel.edu/userportal/) is not functioning. This wiki, and Ganglia are working as normal.
Scheduled Downtime
Proteus will have scheduled downtime roughly once every month.
- Next scheduled downtime: Wed July 18, 2018 9am - 7pm
Staff Out of Office
- Aug 5-10, 2018 - D. Chin will be participating in the ACI-REF Intermediate Virtual Residency Workshop; he will be physically in the office, but not immediately available to respond
Proteus Status
News
- 2018-07-13:
- LAMMPS#CUDA-enabled Version has been updated
- 2018-07-10:
- TensorFlow 1.8.0 using GPUs is now available
- 2018-07-07:
- R Studio now available. See the article on R
- 2018-07-06:
- Caffe#GPU-enabled_Caffe has been updated
- Keras deep learning framework has been installed
- 2018-07-02:
- General information for using the GPU nodes: GPU Jobs. See also Category:GPU for links to examples.
- 2018-06-15:
- NAMD#CUDA-enabled Version using IBVERBS - instructions for running with charmrun
- Added NAMD (ibverbs, smp, CUDA) compilation instructions - Compiling NAMD#GCC with IB Verbs .2B CUDA 6.5
- 2018-06-08:
- GPU nodes are now open for general use. See Category:GPU
- 2018-06-06:
- Where to store data: see Introduction_to_Using_Proteus#Where_to_Keep_Data
- 2018-05-30:
- Ruby 2.5.1 installed
- 2018-05-29:
- 2018-05-25:
- Mathematica 11.3 has been installed
- 2018-05-04:
- VinaLC molecular docking software has been installed
- 2018-04-09:
- ExaBayes bioinformatics software has been installed
- 2018-04-06:
Known Issues
- Text entry (e.g search) in the mobile view of this wiki is broken
- Password change after expiration is broken. See Introduction to Using_Proteus#Changing Passwords. Please email urcf-support for a manual reset.
- 4 AMD nodes are offline
URCF Proteus Documentation Wiki
You can login here with your Proteus account: select drexel_urcf in the dropdown menu on the login page. Please feel free to create and edit articles if you wish.
Documentation is being created as we go along. Please see the Recent Changes page for updates.
System Information and Policies
- Facility Description for Proposals
- Proteus Hardware and Software
- Terms of Use
- Job Scheduling Algorithm
- Benchmarks
Getting Started
- Usage rates
- Introduction to Using Proteus
- Grid Engine Quick Start Guide
- Recommendations for Jobs
- Miscellaneous Tips
- Installing Software for Your Research Group
- Frequently Encountered Problems
- List of Online Resources
- Articles here are collected into Special:Categories
See also all the articles in the Category:Quick Start Guides
Other Online Documentation
Useful Links
- Proteus Web User Portal -- login with your Proteus account
- Proteus load monitoring
- List of all articles in this wiki
- List of files available (PDFs of documentation, etc.)
